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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903562.1_cds_XP_016453658.1_47761
CDS Infomation

[gene=LOC107777997] [db_xref=GeneID:107777997] [protein=putative E3 ubiquitin-protein ligase XBAT31] [protein_id=XP_016453658.1] [location=join(112378..112557,112652..112723,112958..113029,116297..116393,116476..116617,116749..116856,117069..117318,117533..117952)] [gbkey=CDS]
Sequence

ATGGGTCAGGGACTCAGTTGTGGAGCAAGTGATGAACATGGACTATTCAGTGCTGTTCAA
TGTGGTGATTTAGAGACTGTAAAGGCTCTGATGGAGAGAAACCCGAGTCTTGTTCACCAT
TCTACAATTTATGATCGCCAGTCTGCTTTACATATTGCTGCTGCCAATGGCCAGATTGAG
ATGTTCTTTCAGGTTGTTTCTATGCTTATAGACCAGTCCGTCAATCCTGATCTATTGAAT
CGGTATAAGCAGACTCCATTGATGCTGGCAGCCATGCACGGGAAGCTCTCTTGTGTGCAA
AAGCTTATTGAAGCAGGGGCTAATATTTTGATGTTTGATTCGCTTAATGGAAGAACATGC
TTACACTATGCTGCCTATTATGGTCGCATCTTCCTGGTAAAAGCCTCTATGAGAATTCAC
TGGGGATATGCCCGGTTTGTGAACGTTAAAGATGGTAAGGGAGCAACACCGTTGCACTTA
GCAGCCCGTCAAAGACGGCCTGAATGTGTTCATTTTTTACTGGACAATGGTGCTTTGGTC
TATGCTTCAACTGGTGGATACGGTTTCCCCGGTAGCTCACCACTTCACTTGGCTGCAAGA
GCTGGTTCTCTTGATTGCGTCCGCGAATTGTTAGCCTGGGGAGCAGATCGATTACACAGA
GATGATTCAGGGAGAATACCATTCACGGTTGCTTTAAGATACAAACATGGTGCGTGCGCG
GTTTTGCTGAATCCTTCATCCGCAGAGCCTCTTGTCTGGCCATCGTCATTGAAGTTCGTC
AGTGAGCTCAATGAAGAGGCAAAATCTTTGCTAGAACGCGCCCTGATGGAGGTTAACAAG
GAGAGGGAAAAGAATATCCTAAAAGGAACAGCTTATTCGGCAATCAATTCTGATGATGGG
ATGGATGGTAATATCTCTGAGGTGAGTGACACAGAAGTTTGTTGTATATGCTTTGATCAA
TTATGCACAATTCAGGTGCAGGAGTGCGGGCACCAGATGTGTGCACATTGCATACTGGCC
TTGTGCTGTCATAGCAAGCCTAATACTACTACGACTAGTCCTACCGAACCTCTGTGCCCA
TTCTGCCGTAGTAGAATTGTACAATTGCAAGTTATCAAGTTTGAAAAGGATGAAGACACA
AGCCATGATATCTACTCCTCCAAGATTAGGAAGTCTAGGAGGTCAAGAAACTTCAGTGAG
GGAAGTAGTAGTTTTAAGGGCTTATCTGCAGTGAGATCTTTTGGTAAAATGACTGGACGT
GGCTCAGGTAGGATTGCTGCTGAAAACGAATATATCGATAAGCCAATAAACCCTAGACTG
ATTGCAGACATTGGCTATTAA

Peptide Sequence

PEP ID

XP_016453658.1
PEP Infomation

PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tabacum]
Sequence

MGQGLSCGASDEHGLFSAVQCGDLETVKALMERNPSLVHHSTIYDRQSALHIAAANGQIE
MFFQVVSMLIDQSVNPDLLNRYKQTPLMLAAMHGKLSCVQKLIEAGANILMFDSLNGRTC
LHYAAYYGRIFLVKASMRIHWGYARFVNVKDGKGATPLHLAARQRRPECVHFLLDNGALV
YASTGGYGFPGSSPLHLAARAGSLDCVRELLAWGADRLHRDDSGRIPFTVALRYKHGACA
VLLNPSSAEPLVWPSSLKFVSELNEEAKSLLERALMEVNKEREKNILKGTAYSAINSDDG
MDGNISEVSDTEVCCICFDQLCTIQVQECGHQMCAHCILALCCHSKPNTTTTSPTEPLCP
FCRSRIVQLQVIKFEKDEDTSHDIYSSKIRKSRRSRNFSEGSSSFKGLSAVRSFGKMTGR
GSGRIAAENEYIDKPINPRLIADIGY

Transcript Sequence

Gene sequence data has not been registered.